qsm_core/inversion/
mod.rs

1//! Dipole inversion methods for QSM
2//!
3//! This module provides various methods to solve the inverse problem
4//! of estimating magnetic susceptibility from local field measurements.
5//!
6//! Methods include:
7//! - TKD: Truncated k-space division (fast, simple)
8//! - TSVD: Truncated SVD (zeros small values)
9//! - Tikhonov: L2 regularization (closed-form)
10//! - TV: Total variation regularization via ADMM (iterative)
11//! - NLTV: Nonlinear TV with iterative reweighting
12//! - RTS: Rapid two-step method
13//! - MEDI: Morphology-enabled dipole inversion
14//! - TGV: Total Generalized Variation (single-step from wrapped phase)
15
16pub mod admm;
17pub mod tkd;
18pub mod tikhonov;
19pub mod tv;
20pub mod nltv;
21pub mod rts;
22pub mod medi;
23pub mod tfi;
24pub mod tgv;
25pub mod ilsqr;
26pub mod ndi;
27pub mod fansi;
28pub mod l1qsm;
29pub mod whqsm;
30pub mod hdqsm;
31pub mod amp_pe;
32#[cfg(feature = "onnx")]
33pub mod tiled;
34#[cfg(feature = "onnx")]
35pub mod xqsm;
36#[cfg(feature = "onnx")]
37pub mod qsmnet;
38#[cfg(feature = "onnx")]
39pub mod autoqsm;
40#[cfg(feature = "onnx")]
41pub mod iqsm;
42#[cfg(feature = "onnx")]
43pub mod iqsm_plus;
44#[cfg(feature = "onnx")]
45pub mod iqfm;
46#[cfg(feature = "onnx")]
47pub mod qsmgan;
48#[cfg(feature = "onnx")]
49pub mod lpcnn;
50#[cfg(feature = "onnx")]
51pub mod ir2qsm;
52#[cfg(feature = "onnx")]
53pub mod modl_qsm;
54#[cfg(feature = "onnx")]
55pub mod nextqsm;
56
57pub use tkd::{tkd, tsvd, TkdParams};
58pub use tikhonov::{tikhonov, TikhonovParams, Regularization};
59pub use tv::{tv_admm, TvParams};
60pub use nltv::{nltv, NltvParams};
61pub use rts::{rts, RtsParams};
62pub use medi::{medi, MediParams, MediWorkspace};
63pub use tfi::{tfi, TfiParams};
64pub use tgv::{tgv_qsm, TgvParams, get_default_alpha, get_default_iterations};
65pub use ilsqr::{ilsqr, IlsqrParams};
66pub use ndi::{ndi, NdiParams};
67pub use fansi::{fansi, FansiParams};
68pub use l1qsm::{l1qsm, L1QsmParams};
69pub use whqsm::{whqsm, WhQsmParams};
70pub use hdqsm::{hdqsm, HdQsmParams};
71pub use amp_pe::{amp_pe, AmpPeParams};
72#[cfg(feature = "onnx")]
73pub use tiled::{
74    tile_patch_size, tiled_field_inversion, tiled_scatter, tiled_volume_algorithm, Tile, TileConfig,
75};
76#[cfg(feature = "onnx")]
77pub use xqsm::{xqsm, xqsm_tiled};
78#[cfg(feature = "onnx")]
79pub use qsmnet::{qsmnet, qsmnet_tiled, QsmnetNorm};
80#[cfg(feature = "onnx")]
81pub use autoqsm::autoqsm;
82#[cfg(feature = "onnx")]
83pub use iqsm::{iqsm, iqsm_multi_echo};
84#[cfg(feature = "onnx")]
85pub use iqsm_plus::{iqsm_plus, iqsm_plus_multi_echo};
86#[cfg(feature = "onnx")]
87pub use iqfm::{iqfm, iqfm_multi_echo};
88#[cfg(feature = "onnx")]
89pub use qsmgan::qsmgan;
90#[cfg(feature = "onnx")]
91pub use lpcnn::{lpcnn, lpcnn_tiled, LPCNN_ALPHA, LPCNN_GT_MEAN, LPCNN_GT_STD};
92#[cfg(feature = "onnx")]
93pub use ir2qsm::{ir2qsm, ir2qsm_tiled};
94#[cfg(feature = "onnx")]
95pub use modl_qsm::{modl_qsm, modl_qsm_tiled, MODL_ALPHA, MODL_MEAN, MODL_STD};
96#[cfg(feature = "onnx")]
97pub use nextqsm::{nextqsm, nextqsm_padded, nextqsm_tiled, NEXTQSM_LAMBDAS};
qsm_core/inversion/mod.rs

qsm_core/inversion/
mod.rs
