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Frangi Vesselness Filter for 3D tubular structure detection
This filter uses eigenvalues of the Hessian matrix to detect tubular (vessel-like) structures.
Reference: Frangi, A.F., Niessen, W.J., Vincken, K.L., Viergever, M.A. (1998). “Multiscale vessel enhancement filtering.” MICCAI’98, LNCS vol 1496, 130-137. https://doi.org/10.1007/BFb0056195
Reference implementation: https://www.mathworks.com/matlabcentral/fileexchange/24409-hessian-based-frangi-vesselness-filter
Structs§
- Frangi
Params - Parameters for Frangi vesselness filter
- Frangi
Result - Result of Frangi filter including vesselness and scale information
Functions§
- compute_
vesselness 🔒 - Compute vesselness measure from sorted eigenvalues |lambda1| <= |lambda2| <= |lambda3|
- convolve_
1d_ 🔒direction - Apply 1D convolution along specified axis with replicate padding Matches MATLAB’s imgaussian which uses ‘replicate’ boundary handling
- eigenvalues_
3x3_ 🔒cardano - Analytical eigenvalues of 3×3 symmetric matrix using Cardano’s method
- eigenvalues_
3x3_ 🔒symmetric - Compute eigenvalues of a 3x3 symmetric matrix using Householder + QL algorithm
- frangi_
filter_ 3d - Apply 3D Frangi vesselness filter
- frangi_
filter_ 3d_ default - Simple wrapper for Frangi filter with default parameters
- frangi_
filter_ 3d_ with_ progress - Frangi filter with progress callback
- gaussian_
smooth_ 🔒3d - 3D Gaussian smoothing using separable 1D convolutions
- hypot 🔒
- Compute hypotenuse avoiding overflow/underflow
- sort_
by_ 🔒abs - Sort three values by absolute value
- tql2 🔒
- Symmetric tridiagonal QL algorithm
- tred2 🔒
- Symmetric Householder reduction to tridiagonal form