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Module bet

Module bet 

Source
Expand description

Brain extraction.

  • BET (run_bet): mesh-evolution Brain Extraction Tool. Smith, S.M. (2002). “Fast robust automated brain extraction.” Human Brain Mapping, 17(3):143-155. https://doi.org/10.1002/hbm.10062. Reference implementation: https://github.com/Bostrix/FSL-BET2
  • HD-BET (hd_bet, onnx feature): nnU-Net deep-learning brain extraction; see hdbet.

Re-exports§

pub use hdbet::hd_bet;
pub use hdbet::HdBetParams;

Modules§

evolution 🔒
BET surface evolution algorithm
hdbet
HD-BET deep-learning brain extraction (onnx feature).
icosphere 🔒
Icosphere mesh generation
mesh 🔒
Mesh utilities for BET

Structs§

BetParams
BET algorithm parameters

Functions§

run_bet
Run BET brain extraction